Peer-reviewed Publications

Parra, S.M., A.T. Greer, J.W. Book, A.L. Deary, I.M. Soto, C. Culpepper, F.J. Hernandez, T.N. Miles. Acoustic detection of zooplankton diel vertical migration behaviors on the northern Gulf of Mexico shelf (in press) Limnology & Oceanography, doi: 10.1002/lno.11171

Greer, A.T., L.M. Chiaverano, J.G. Ditty, F.J. Hernandez. In situ observations of fish larvae encased within a pelagic gelatinous matrix (2019) Marine Ecology Progress Series, 614: 209-214, doi: 10.3354/meps12916

Dzwonkowski, B., S. Fournier, J.T. Reager, S. Milroy, K. Park, A.M Shiller, A.T. Greer, I. Soto, S.L. Dykstra, V. Sanial (2018) Tracking sea surface salinity and dissolved oxygen on a river-influenced, seasonally stratified shelf, Mississippi Bight, northern Gulf of Mexico. Continental Shelf Research, 169: 25-33 doi: 10.1016/j.csr.2018.09.009

Greer, A.T., A.M. Shiller, E.E. Hofmann, J.D. Wiggert, S.J. Warner, S.M. Parra, C. Pan, J.W. Book, D. Joung, S. Dykstra, J.W. Krause, B. Dzwonkowski, I.M. Soto, M.K. Cambazoglu, A.L. Deary, C. Briseño-Avena, A.D. Boyette, J.A. Kastler, L. Hode, U. Nwankwo, L.M. Chiaverano, V. Sanial, S.J. O’Brien, P.J. Fitzpatrick, Y. Lau, M.S. Dinniman, K.M. Martin, P. Ho, A.K. Mojzis, S.D. Howden, F.J. Hernandez, I. Church, T.N. Miles, S. Sponaugle, J.N. Moum, R.A. Arnone, R.K. Cowen, G.A. Jacobs, O. Schofield, and W.M. Graham (2018) Functioning of coastal river-dominated ecosystems and implications for oil spill response: from observations to mechanisms and models. Oceanography, 31(3): 90-103 doi: 10.5670/oceanog.2018.302

Greer, A.T., L.M. Chiaverano, J.Y. Luo, R.K. Cowen, W.M. Graham (2018) Ecology and behaviour of holoplanktonic scyphomedusae and their interactions with larval and juvenile fishes in the northern Gulf of Mexico. ICES Journal of Marine Science, 75(2): 751-763 doi: 10.1093/icesjms/fsx168

Greer, A.T., C. Briseño-Avena, A.L. Deary, F.J. Hernandez, R.K. Cowen, W.M. Graham (2017) Associations between lobster phyllosoma and gelatinous zooplankton in relation to oceanographic properties in the northern Gulf of Mexico. Fisheries Oceanography, 26(6): 693-704, doi: 10.1111/fog.12228

Dzwonkowski, B., A.T. Greer, C. Briseño-Avena, J.W. Krause, I.M. Soto, F.J. Hernandez, A.L. Deary, J.D. Wiggert, D. Joung, P.J. Fitzpatrick, S.J. O’Brien, S.L. Dykstra, Y. Lau, M.K. Cambazoglu, G. Lockridge, S.D. Howden, A.M. Shiller, W.M. Graham (2017) Estuarine influence on biogeochemical properties of the Alabama shelf during the fall season. Continental Shelf Research, 140: 96-109, doi: 10.1016/j.csr.2017.05.001

Greer, A.T., C.B. Woodson, C.E. Smith, C.M. Guigand, R.K. Cowen (2016) Examining mesozooplankton patch structure and its implications for trophic interactions in the northern Gulf of Mexico. Journal of Plankton Research, 38(4): 1115-1134, doi: 10.1093/plankt/fbw033

Greer, A.T., C.B. Woodson, C.M. Guigand, R.K. Cowen (2016) Larval fishes utilize Batesian mimicry as a survival strategy in the plankton. Marine Ecology Progress Series, 551 (Feature Article): 1-12, doi: 10.3354/meps11751

Greer, A.T. and C.B. Woodson (2016) Application of a predator-prey overlap metric to determine the impact of sub-grid scale feeding dynamics on ecosystem productivity. ICES Journal of Marine Science, 73(4): 1051-1061, doi: 10.1093/icesjms/fsw001

Greer, A.T., R.K. Cowen, C.M. Guigand, J.A. Hare (2015) Fine-scale planktonic habitat partitioning at a shelf-slope front revealed by a high-resolution imaging system. Journal of Marine Systems, 142: 111-125, doi: 10.1016/j.jmarsys.2014.10.008

Luo, J.Y., B. Grassian, D. Tang, J.O. Irisson, A.T. Greer, C.M. Guigand, S. McClatchie, R.K. Cowen (2014) Environmental drivers of the fine-scale distribution of a gelatinous zooplankton community across a mesoscale front. Marine Ecology Progress Series, 510: 129-149, doi: 10.3354/meps10908

Greer, A.T., R.K. Cowen, C.M Guigand, J.A. Hare, D. Tang (2014) The role of internal waves in larval fish interactions with predators and prey. Progress in Oceanography, 127: 47-61, doi: 10.1016/j.pocean.2014.05.010

Sevadjian, J.C., M.A. McManus, J.P. Ryan, A.T. Greer, R.K. Cowen, C.B. Woodson (2014) Across-shore variability in plankton layering and abundance associated with physical forcing in Monterey Bay, California. Continental Shelf Research, 72: 138-151, doi: 10.1016/j.csr.2013.09.018

Timmerman, A.H.V, M.A. McManus, O.M. Cheriton, R.K. Cowen, A.T. Greer, R.M. Kudela, K.C. Ruttenberg, J.C. Sevadjian (2014) Hidden thin layers of toxic diatoms in a coastal bay. Deep Sea Research II, 101: 129-140, doi: 10.1016/j.dsr2.2013.05.030

Greer, A.T., R.K. Cowen, C.M. Guigand, M.A. McManus, J.C. Sevadjian, A.H.V. Timmerman (2013) Relationships between phytoplankton thin layers and the fine-scale vertical distribution of two trophic levels of zooplankton. Journal of Plankton Research, 35(5) (Featured Article and cover image): 939-956, doi: 10.1093/plankt/fbt056


Cowen, R.K., A.T. Greer, C.M. Guigand, J.A. Hare, D.E. Richardson, H.J. Walsh (2013) Evaluation of the In Situ Ichthyoplankton Imaging System (ISIIS): comparison with the traditional (bongo net) sampler. Fishery Bulletin, 38: 1-12, doi: 10.7755/FB.111.1.1

McClatchie, S., R.K. Cowen, K. Nieto, A.T. Greer, J.Y. Luo, C. Guigand, D. Demer, D. Griffith, D. Rudnick (2012) Resolution of fine biological structure including small narcomedusae across a front in the Southern California Bight. Journal of Geophysical Research, 117, C04020, doi: 10.1029/2011JC007565

Other Publications (not peer-reviewed)

Greer, A.T. (2018) Technology overview: In situ shadowgraph imaging. Marine Technology Society Journal 52(6): 62-65

Greer, A.T. (2015) Review of: Impacts of Oil Spill Disasters on Marine Habitats and Fisheries in North America. Copeia 103(4): 1102-1116.

Numerous blog entries on the Plankton Portal (agreer35)